The integration and development of the supply chain is a competitive advantage in the corporate environment. In the biofuels market, this analysis becomes even more significant, given the low operating margins that the sector has shown. In this dissertation we propose the analysis of the level of maturity between agricultural supply chains with a focus on producing biofuels in Brazil. For this analysis we have developed an analytical framework consisting of indicators with two main drivers, the first one represents the integration level of the supply chain, and the second one represents the development of logistics operations level such as transportation and industrial operation. The result of this analysis demonstrates, through a scatter plot, that the soybean and sugarcane chains are in maturity levels above than two other chains analyzed, the palm and castor bean.